[1]

T. S. Pugacheva, F. G. Djurabekova, S. A. Lem, and Y. Miyagawa, The radiation stimulated diffusion role in high dose, low energy, high temperature ion implantation, Nucl. Inst. and Meth. in Phys. Res., B 127/128, 265 (1997).

[2]

T. S. Pugacheva, F. G. Djurabekova, S. A. Lem, Y. Miyagawa and S. Kh.Valiev, Computer Simulation of SiC and B₄C sputtering by Ar⁺ and He⁺ ions bombardment, Nucl. Inst. and Meth. in Phys. Res., B 127/128, 260 (1997).

[3]

T. S. Pugacheva, F. G. Djurabekova, and S. Kh.Valiev, Effects of cascade mixing, sputtering and diffusion by high dose light ion irradiation of boron nitride, Nucl. Inst. and Meth. in Phys. Res., B 141, 99 (1998).

[4]

Y. Miyagawa, F. Djurabekova, and S. Miyagawa, in Ion Beam Synthesis and Processing of Advanced Materials, Vol. 647 of MRS Symposium Proceedings, edited by D. B. Poker, S. C. Moss, and K.-H. Heinig (MRS, Warrendale, PA, USA, 2000), pp. O11.12.1 - O11.12.6.

[5]

F. G. Djurabekova, F. F. Umarov, and S. Yugai, Computer simulation of ion implantation with visual observation of the implantation profiles, 0-7803-6462-7/00/$10.00 (c)2000 IEEE 228 (2000), 0-7803-6462-7/00/$10.00 (c)2000.

[6]

Y. Miyagawa, F. Djurabekova, S. Nakao, and S. Miyagawa, Dynamic MC Simulation of the DLC Film Synthesis by PBII, Proceedings of PSS-2001/SPP (Kyoto, Japan) 18, 637 (2001).

[7]

Y. Miyagawa, H. Nakadate, F. Djurabekova, S. Nakao and S. Miyagawa, Dynamic-SASAMAL :Simulation Software For High Dose Ion Implantation, Surf.&Coat. Tech. 158-159, 87 (2002).

[8]

F. Djurabekova, B. Umirzakov, F. F. Umarov, and Y. Miyagawa, Effect of high-dose low-energy reactive-ion implantation on cold cathode properties, Nucl. Inst. and Meth. in Phys. Res., B 206, 194 (2003).

[9]

F. F. Umarov, N. N. Bazarbaev, F. G. Djurabekova, B. L. Kudryashova and J. M. Eregepova, The peculiarities of the low-energy ion scattering by polycrystal targets, Poverhnost 12, 71 (2004), in Russian.

[10]

R. Domingos, F. Djurabekova, L. Malerba, and G. Cerchiara, in Applied Computational Intelligence (World Scientific, Singapore, 2006), Vol. 1, pp. 883 - 890.

[11]

R. P. Domingos, F. Djurabekova, L. Malerba, and G. Cerchiara, in MMM Third International Conference Multiscale Materials Modeling (FraunhoferIRB Verlag, Freiburg, 2006), p. 721.

[12]

F. G. Djurabekova, L. Malerba, C. Domain, and C. S. Becquart, Stability and mobility of small vacancy and copper-vacancy clusters in bcc-Fe: An atomistic Kinetic Monte Carlo study, Nucl. Inst. & Meth. in Phys. Res. B 255, 45 (2007).

[13]

F. G. Djurabekova, R. Domingos, G. Cerchiara, N. Castin, E. Vincent and L. Malerba, Artificial intelligence applied to atomistic kinetic Monte Carlo simulations in Fe-Cu alloys, Nucl. Inst. & Meth. in Phys. Res. B 255, 8 (2007).

[14]

P. Kluth, C. S. Schnohr, O. H. Pakarinen, F. Djurabekova, D. J. Sprouster, R. Giulian, M. C. Ridgway, A. P. Byrne, C. Trautmann, D. J. Cookson, K. Nordlund and M. Toulemonde, Fine structure in swift heavy ion tracks in amorphous SiO₂, Phys. Rev. Lett. 101, 175503 (2008).

[15]

F. Djurabekova, M. Backman, and K. Nordlund, Atomistic modelling of the interface of Si nanocrystal structures in a-SiO₂ before and after ion irradiation, Nucl. Inst. and Meth. in Phys. Res., B 266, 2683 (2008).
[ DOI ]

[16]

F. Djurabekova, C. Björkas, and K. Nordlund, Atomistic modelling of the interface structure of Si nanocrystals in silica, J. Phys.: Conf. Ser. 100, 052023 (2008).

[17]

F. Djurabekova and K. Nordlund, Atomistic simulation of the interface structure of Si nanocrystals embedded into amorphous silica, Phys. Rev. B 77, 115325 (2008), also selected to Virtual Journal of Nanoscale Science & Technology Vol. 17 Issue 13 (2008).

[18]

J. Keinonen, F. Djurabekova, K. Nordlund, and K. P. Lieb, in Silicon nanophotonics: Basic Principles, Present Status and Perspectives, edited by L. Khriachtchev (World Scientific, Singapore, 2008), Chap. 14. Light Emitting Defects in Ion-Irradiated Alpha-Quartz, pp. 379-396.

[19]

O. H. Pakarinen, F. Djurabekova, K. Nordlund, P. Kluth and M. Ridgway, Molecular dynamics simulations of the structure of latent tracks in quartz and amorphous SiO₂, Nucl. Instr. Meth. Phys. Res. B 267, 1456 (2009).

[20]

F. Djurabekova, M. Backman, O. H. Pakarinen, K. Nordlund, L. L. Araujo and M. C. Ridgway, Amorphization of Ge nanocrystals embedded in amorphous silica under ion irradiation, Nucl. Instr. Meth. Phys. Res. B 267, 1235 (2009).

[21]

J. A. Pakarinen, M. Backman, F. Djurabekova, and K. Nordlund, Partial melting mechanisms of embedded nanocrystals, Phys. Rev. B 79, 085426 (2009), also selected to Virtual Journal of Nanoscale Science & Technology Vol. 19 Issue 10 (2009).

[22]

M. Backman, F. Djurabekova, O. H. Pakarinen, K. Nordlund, L. L. Araujo and M. C. Ridgway, Amorphization of Ge and Si nanocrystals embedded in amorphous SiO₂ by ion irradiation, Phys. Rev. B 80, 144109 (2009).

[23]

F. Djurabekova, M. Backman, O. H. Pakarinen, K. Nordlund, L. L. Araujo and M. C. Ridgway, Proceedings of the 2009 Ion-Solid Interactions conference (Moscow aviation institute publisher, Moscow, Russia, 2009), Vol. 2, pp. 149-152.

[24]

B. L. Oksengendler, N. N. Turaeva, S. E. Maksimov, and F. G. Djurabekova, Features of radiation defects formation in nanocrystals embedded in amorphous matrix (in Russian), JETP 138, 469 (2009).

[25]

F. Djurabekova, L. Malerba, R. C. Pasianot, and P. Olsson, Kinetics versus thermodynamics in materials modelling: the case of the di-vacancy in iron, Phil. Mag. 90, 2585 (2010).
[ DOI ]

[26]

L. Malerba, M. C. Marinica, N. Anento, C. Bj{\"o}rkas, H. Nguyen, C. Domain, F. Djurabekova, P. Olsson, K. Nordlund, A. Serra, D. Terentyev, F. Willaime and C.S. Becquart, Comparison of empirical interatomic potentials for iron applied to radiation damage studies, J. Nucl. Mater. 406, 19 (2010).

[27]

H. Timko, F. Djurabekova, L. Costelle, K. Nordlund, K. Matyash, R. Schneider, A. Toerklep, G. Arnau-Izquierdo, A. Descoeudres, S. Calatroni, M. Taborelli and W. Wuensch, Mechanism of surface modification from the arc plasma-surface interaction in Cu, Phys. Rev. B 81, 184109 (2010).

[28]

F. Djurabekova, M. Backholm, M. Backman, O. H. Pakarinen, J. Keinonen, K. Nordlund, T-R. Shan, B. D. Devine and S. B. Sinnott, Amorphization of α-quartz and comparative study of defects in amorphized quartz and Si nanocrystals embedded in amorphous silica, Nucl. Instr. Meth. Phys. Res. B 268, 3095 (2010).

[29]

A. Sakko, C. Sternemann, Ch. J. Sahle, H. Sternemann, O. M. Feroughi, H. Conrad, F. Djurabekova, M. Tolan and K. H{\"a}m{\"a}l{\"a}inen, Si/SiO₂ interface in disproportionating a-SiO studied by x-ray Raman scattering, Phys. Rev. B 81, 205317 (2010).

[30]

F. Djurabekova, M. Backman, O. H. Pakarinen, K. Nordlund, L. L. Araujo and M. C. Ridgway, Alternation of crystal structure of Ge nanocrystals embedded in amorphous SiO₂ by ion irradiation (in Russian), Uzbek Journal of Physics 12, 76 (2010).

[31]

A. Descoeudres, F. Djurabekova, and K. Nordlund, DC Breakdown experiments with cobalt electrodes, CLIC-Note 875, 1 (2010).

[32]

M. Backman, F. Djurabekova, O. H. Pakarinen, K. Nordlund and M. Toulemonde, in Basic Actinide Science and Materials for Nuclear Applications, No. 1264-BB02-07 in Mater. Res. Soc. Symp. Proc., edited by J. Gibson et al. (PUBLISHER, Warrendale, PA, USA, 2010).

[33]

O. H. Pakarinen, F. Djurabekova, and K. Nordlund, Density evolution in formation of swift heavy ion tracks in insulators, Nucl. Instr. Meth. Phys. Res. B 268, 3163 (2010).

[34]

S. Calatroni, A. Descoeudres, A. Hansen, J. W. Kovermann, M. Taborelli, H. Timko, W. Wuensch, F. Djurabekova, K. Nordlund, A. Pohjonen and A. Kuronen, Proceedings of 2010 LINAC conferece (Joint Accelerator Conference Website, http://epaper.kek.jp/index.html, 2010).

[35]

R. P. Domingos, F. Djurabekova, N. Castin, and L. Malerba, in Modelagem Computacional em Materiais, 1 ed., edited by F. M. Neto and I. B. Gustavo Platt (Rio de Janeiro: Editora Ciência Moderna, ADDRESS, 2010), Chap. Inteligência Artificial Aplicada à Simulação Multiescala de Ligas Fe-Cu, pp. 169-182.

[36]

H. Timko, K. Matyash, R. Schneider, F. Djurabekova, K. Nordlund, A. Hansen, A. Descoeudres, J. Kovermann, A. Grudiev, W. Wuensch, S. Calatroni and M. Taborelli, A One-Dimensional Particle-in-Cell Model of Plasma Build-up in Vacuum Arcs, Contrib. Plasma Physics 51, 5 (2011).

[37]

A. Pohjonen, F. Djurabekova, A. Kuronen, K. Nordlund, S. Fitzgerald, Dislocation nucleation from near surface void under static tensile stress on surface in Cu, Jour. Appl. Phys. 110, 023509 (2011).

[38]

F. Djurabekova, S. Parviainen, A. Pohjonen, and K. Nordlund, Atomistic modeling of metal surfaces under electric fields: Direct coupling of electric fields to a molecular dynamics algorithm, PRE 83, 026704 (2011).
[ DOI | http ]

[39]

S. A. Norris, J. Samela, C. S. Madi, M. P. Brenner, L. Bukonte, M. Backman, F. Djurabekova, K. Nordlund and M. J. Aziz, MD-Predicted Phase diagrams for Pattern Formation, Nature communications 2, 276 (2011).
[ DOI ]

[40]

P. Kluth, O. H. Pakarinen, F. Djurabekova, R. Giulian, M. C. Ridgway, A. P. Byrne and K. Nordlund, Nanoscale density fluctuations in swift heavy ion irradiated amorphous SiO₂, J.Appl.Phys. 110, (2011),
[ DOI ]

[41]

S. Parviainen, F. Djurabekova, A. Pohjonen, and K. Nordlund, Molecular dynamics simulations of nanoscale metal tips under electric fields, Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms 269, 1748 (2011).
[ DOI | http ]

[42]

S. Parviainen, F. Djurabekova, H. Timko, and K. Nordlund, Implementation of electronic processes into molecular dynamics simulations of nanoscale metal tips under electric fields, Computational Materials Science 50, 2075 (2011).
[ DOI | http ]

[43]

M. W. Ullah, A. Kuronen, F. Djurabekova, K. Nordlund and P. Karaseov, Proceedings of the 2011 Ion-Solid Interactions conference (Moscow aviation institute publisher, Moscow, Russia, 2011).

[44]

F. Djurabekova, E. Holmstrom, S. Maksimov, and B. L. Oksengedler, Proceedings of the 2011 Ion-Solid Interactions conference (Moscow aviation institute publisher, Moscow, Russia, 2011).

[45]

A. A. Leino, O. H. Pakarinen, F. Djurabekova, and K. Nordlund, A study on the elongation of embedded Au nanoclusters in SiO₂ by swift heavy ion irradiation using MD simulations, Nucl. Instr. Meth. Phys. Res. B (2011), EMRS 2011 proceedings, accepted.

[46]

K. B. Ashurov, F. Djurabekova, S. E. Maksimov, A. I. Nikiforov, S. Tadjimuratov and B. L. Oksengendler, Epitaxial growth of Ge nanoislands on Si/Ge heterostructure by ion-assisted MBE method, Nucl. Instr. Meth. Phys. Res. B (2011), eMRS 2011 proceedings, accepted.

[47]

K. Nordlund and F. Djurabekova, Defect model for the dependence of breakdown rate on external electric fields, Phys. Rev. ST-AB (2011), submitted for publication.

[48]

H. Timko, M. Aicheler, P. Alknes, S. Calatroni, A. Oltedal, A. Toerklep, M. Taborelli, W. Wuensch, F. Djurabekova and K. Nordlund, Energy Dependence of Processing and Breakdown Properties of Cu and Mo, Phys. Rev. ST-AB 14, 101003 (2011).

[49]

F. Djurabekova, J. Samela, H. Timko, K. Nordlund, S. Calatroni, M. Taborelli and W. Wuensch, Crater formation by single ions, cluster ions and ion “showers”, Nucl. Instr. Meth. Phys. Res. B 272, 374 (2012).

[50]

A. S. Pohjonen, F. Djurabekova, A. Kuronen, S. G. Fitzgerald and K. Nordlund, Analytical model of dislocation nucleation on a near-surface void under tensile surface stress, Phil. Mag. (2011), submitted for publication.

[51]

H. Timko, K. Matyash, R. Schneider, F. Djurabekova, K. Nordlund, S. Calatroni and W. Wuensch, Modeling of cathode plasma initiation in copper vacuum arc discharges via particle-in-cell simulations, Physics of Plasmas (2011), submitted for publication.

[52]

F. Granberg, S. Parviainen, F. Djurabekova, and K. Nordlund, Investigation of the thermal stability of Cu nanowires using atomistic simulations, J. Appl. Phys. (2011), submitted for publication.

[53]

M. W. Ullah, A. Kuronen, K. Nordlund, F. Djurabekova, P. Karaseov, and A. I. Titov, Atomistic simulation of damage production by atomic and molecular irradiation in GaN, J. Appl. Phys. (2012), submitted for publication.

[54]

A. Pohjonen, F. Djurabekova, A. Kuronen, and K. Nordlund, MD simulations of near surface void in copper under thermal compression, MRS Symposium Proceedings, edited by S. Persheyev (MRS, Warrendale, PA, USA, 2011).

[55]

M. Backman, F. Djurabekova, O. H. Pakarinen, K. Nordlund, Y. Zhang, M. Toulemonde, and W. J. Weber, Synergy of electronic and nuclear stopping in ion irradiation damage in silica, Phys. Rev. B (2012), submitted for publication.

[56]

M. Backholm et al., Absence of single threshold dose for the amorphization of quartz under ion irradiation, J. Appl. Phys. (2012), submitted for publication.

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